Interface | Description |
---|---|
AnnotationPredictor |
given a bioentity, predict a set of annotations
|
Class | Description |
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AbstractAnnotationPredictor | |
BasicAnnotationPropagator |
This performs basic annotation inferences involving propagation between the 3
sub-ontologies in GO
MF -> BP over part_of
BP -> CC over occurs_in
This approach pre-computes the possible non-redundant propagations classes
for each class during the setup.
|
ClassTaxonMatrix |
Matrix representing the applicability of classes and taxa.
|
CompositionalClassPredictor | Deprecated |
FoldBasedPredictor |
Use a reasoner to find more specific named classes for annotations with extension expressions.
|
Prediction | |
TaxonConstraintsEngine | Deprecated
There is now a taxon checks using an OWL resoner.
|
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