public class OwlSimUtil extends Object
Constructor and Description |
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OwlSimUtil() |
Modifier and Type | Method and Description |
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static void |
addElementLabels(org.semanticweb.owlapi.model.OWLOntology ont,
File file) |
static void |
addElementLabels(org.semanticweb.owlapi.model.OWLOntology ont,
String filepath) |
static void |
addElementToAttributeAssociationsFromFile(org.semanticweb.owlapi.model.OWLOntology ont,
File file) |
static void |
compareLCSWithEnrichmentGrouping(org.semanticweb.owlapi.model.OWLOntology ont,
Double pthresh,
OWLPrettyPrinter owlpp) |
static OwlSim |
createOwlSimFromOntologyFile(File file) |
static OwlSim |
createOwlSimFromOntologyFile(String filepath)
Generates an OwlSim object from an ontology file
does *not* call
|
static OwlSim |
createOwlSimFromOntologyFiles(String ontologyFile,
Set<String> assocFiles,
Set<String> labelFiles) |
public static OwlSim createOwlSimFromOntologyFiles(String ontologyFile, Set<String> assocFiles, Set<String> labelFiles) throws org.semanticweb.owlapi.model.OWLOntologyCreationException, org.obolibrary.oboformat.parser.OBOFormatParserException, IOException, UnknownOWLClassException
ontologyFile
- assocFiles
- labelFiles
- org.semanticweb.owlapi.model.OWLOntologyCreationException
org.obolibrary.oboformat.parser.OBOFormatParserException
IOException
UnknownOWLClassException
public static OwlSim createOwlSimFromOntologyFile(String filepath) throws org.semanticweb.owlapi.model.OWLOntologyCreationException, org.obolibrary.oboformat.parser.OBOFormatParserException, IOException
filepath
- org.semanticweb.owlapi.model.OWLOntologyCreationException
IOException
org.obolibrary.oboformat.parser.OBOFormatParserException
public static OwlSim createOwlSimFromOntologyFile(File file) throws org.semanticweb.owlapi.model.OWLOntologyCreationException, org.obolibrary.oboformat.parser.OBOFormatParserException, IOException
file
- org.semanticweb.owlapi.model.OWLOntologyCreationException
IOException
org.obolibrary.oboformat.parser.OBOFormatParserException
public static void addElementToAttributeAssociationsFromFile(org.semanticweb.owlapi.model.OWLOntology ont, File file) throws IOException
IOException
public static void addElementLabels(org.semanticweb.owlapi.model.OWLOntology ont, String filepath) throws IOException
IOException
public static void addElementLabels(org.semanticweb.owlapi.model.OWLOntology ont, File file) throws IOException
IOException
public static void compareLCSWithEnrichmentGrouping(org.semanticweb.owlapi.model.OWLOntology ont, Double pthresh, OWLPrettyPrinter owlpp) throws UnknownOWLClassException, org.apache.commons.math.MathException
UnknownOWLClassException
org.apache.commons.math.MathException
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