Uses of Interface
owltools.gaf.inference.AnnotationPredictor

Packages that use AnnotationPredictor
owltools.gaf.inference Perform inference on Gene Associations 
 

Uses of AnnotationPredictor in owltools.gaf.inference
 

Classes in owltools.gaf.inference that implement AnnotationPredictor
 class AbstractAnnotationPredictor
           
 class BasicAnnotationPropagator
          TODO: this class has not yet been tested! This performs basic annotation inferences involving propagation between the 3 sub-ontologies in GO MF -> MP over part_of BP -> CC over occurs_in TODO: reimplement using OWL semantics and reasoning
 class CompositionalClassPredictor
          Given an annotation to classes c1, c2, ..., cn, we generate suggestions of annotations to class D if D EquivalentTo d1 and d2 and dm and forall d in d1..dm, there exists a class c in c1...cn such that: Path(c,d) OR d = r some e, and Path(c,e) (i.e.
 



Copyright © 2010-2012. All Rights Reserved.