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public interface AnnotationRulesFactory
Method Summary | |
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List<AnnotationRule> |
getGafDocumentRules()
Get the list of rules, which require a global view of the GAF ( GafDocument ). |
List<AnnotationRule> |
getGeneAnnotationRules()
Get the list of rules to be applied for each GeneAnnotation |
OWLGraphWrapper |
getGraph()
Get the underlying ontology graph for this rule factory. |
List<AnnotationRule> |
getOwlRules()
Get the list of rules, which require a global view of the GAF ( GafDocument ) and OWL. |
void |
init()
Initialize the factory. |
Method Detail |
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void init()
List<AnnotationRule> getGeneAnnotationRules()
GeneAnnotation
List<AnnotationRule> getGafDocumentRules()
GafDocument
).
List<AnnotationRule> getOwlRules()
GafDocument
) and OWL.
OWLGraphWrapper getGraph()
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