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owltools.gaf.* |
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owltools.gaf.EcoTools | ||
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public static final String |
ECO_PURL |
"http://purl.obolibrary.org/obo/eco.owl" |
owltools.gaf.GAFParser | ||
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public static final int |
ANNOTATION_XP |
15 |
public static final int |
ASPECT |
8 |
public static final int |
ASSIGNED_BY |
14 |
public static final int |
DATE |
13 |
public static final int |
DB |
0 |
public static final int |
DB_OBJECT_ID |
1 |
public static final int |
DB_OBJECT_NAME |
9 |
public static final int |
DB_OBJECT_SYMBOL |
2 |
public static final int |
DB_OBJECT_SYNONYM |
10 |
public static final int |
DB_OBJECT_TYPE |
11 |
public static final int |
EVIDENCE |
6 |
public static final int |
GENE_PRODUCT_ISOFORM |
16 |
public static final int |
GOID |
4 |
public static final int |
QUALIFIER |
3 |
public static final int |
REFERENCE |
5 |
public static final int |
TAXON |
12 |
public static final int |
WITH |
7 |
owltools.gaf.rules.GenericReasonerValidationCheck | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.gold.rules.GenericReasonerValidationCheck" |
owltools.gaf.rules.go.BasicChecksRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.gold.rules.BasicChecksRule" |
owltools.gaf.rules.go.GoAnnotationTaxonRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.gold.rules.AnnotationTaxonRule" |
owltools.gaf.rules.go.GoBindingCheckWithFieldRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000003" |
owltools.gaf.rules.go.GoClassReferenceAnnotationRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.gold.rules.GoClassReferenceAnnotationRule" |
owltools.gaf.rules.go.GoICAnnotationRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000016" |
owltools.gaf.rules.go.GoIDAAnnotationRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000017" |
owltools.gaf.rules.go.GoIEPRestrictionsRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000006" |
owltools.gaf.rules.go.GoIPIAnnotationRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000018" |
owltools.gaf.rules.go.GoIPICatalyticActivityRestrictionsRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000007" |
owltools.gaf.rules.go.GoMultipleTaxonRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000015" |
owltools.gaf.rules.go.GoNDAnnotationRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000011" |
owltools.gaf.rules.go.GoNoISSProteinBindingRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000005" |
owltools.gaf.rules.go.GOReciprocalAnnotationRule | ||
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public static final String |
PERMANENT_JAVA_ID |
"org.geneontology.rules.GO_AR_0000004" |
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