owltools.gaf.owl
Class AnnotationExtensionFolder

java.lang.Object
  extended by owltools.gaf.owl.GAFOWLBridge
      extended by owltools.gaf.owl.AnnotationExtensionFolder

public class AnnotationExtensionFolder
extends GAFOWLBridge


Nested Class Summary
 
Nested classes/interfaces inherited from class owltools.gaf.owl.GAFOWLBridge
GAFOWLBridge.BioentityMapping, GAFOWLBridge.Vocab
 
Field Summary
 
Fields inherited from class owltools.gaf.owl.GAFOWLBridge
GAF_LINE_NUMBER_ANNOTATION_PROPERTY_IRI, graph
 
Constructor Summary
AnnotationExtensionFolder(OWLGraphWrapper g)
           
 
Method Summary
 void fold(GafDocument gdoc)
           
 Collection<GeneAnnotation> fold(GafDocument gdoc, GeneAnnotation ann)
           
 
Methods inherited from class owltools.gaf.owl.GAFOWLBridge
getBioentityMapping, getObjectPropertyByShorthand, getOWLClass, getTargetOntology, isGenerateIndividuals, setBioentityMapping, setGenerateIndividuals, setTargetOntology, translate
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

AnnotationExtensionFolder

public AnnotationExtensionFolder(OWLGraphWrapper g)
Method Detail

fold

public void fold(GafDocument gdoc)

fold

public Collection<GeneAnnotation> fold(GafDocument gdoc,
                                       GeneAnnotation ann)


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