owltools.gaf.rules.go
Class GoIPICatalyticActivityRestrictionsRule
java.lang.Object
owltools.gaf.rules.AbstractAnnotationRule
owltools.gaf.rules.go.GoIPICatalyticActivityRestrictionsRule
- All Implemented Interfaces:
- AnnotationRule
public class GoIPICatalyticActivityRestrictionsRule
- extends AbstractAnnotationRule
GO_AR:0000007
Field Summary |
static String |
PERMANENT_JAVA_ID
The string to identify this class in the annotation_qc.xml and related factories. |
Methods inherited from class owltools.gaf.rules.AbstractAnnotationRule |
getDate, getDescription, getGrandFatheringDate, getName, getRuleId, getRuleViolations, getRuleViolations, getStatus, hasGrandFathering, isAnnotationLevel, isDocumentLevel, isOwlDocumentLevel, setDate, setDescription, setGrandFatheringDate, setName, setRuleId, setStatus |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
PERMANENT_JAVA_ID
public static final String PERMANENT_JAVA_ID
- The string to identify this class in the annotation_qc.xml and related factories.
This is not supposed to be changed.
- See Also:
- Constant Field Values
GoIPICatalyticActivityRestrictionsRule
public GoIPICatalyticActivityRestrictionsRule(OWLGraphWrapper graph,
TraversingEcoMapper eco)
getRuleViolations
public Set<AnnotationRuleViolation> getRuleViolations(GeneAnnotation a)
- Description copied from interface:
AnnotationRule
- Given an annotation, find the set of violations using the rule
- Specified by:
getRuleViolations
in interface AnnotationRule
- Specified by:
getRuleViolations
in class AbstractAnnotationRule
- Parameters:
a
- annotation
- Returns:
- set of violations
- See Also:
AnnotationRule.isAnnotationLevel()
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