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java.lang.Objectowltools.gaf.eco.EcoMapperImpl
public class EcoMapperImpl
Field Summary |
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Fields inherited from interface owltools.gaf.eco.EcoMapper |
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ECO_MAPPING_PURL, ECO_PURL, ECO_PURL_IRI |
Method Summary | |
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Set<org.semanticweb.owlapi.model.OWLClass> |
getAllEcoClassesForCode(String code)
Retrieve the ECO classes for the given GO evidence code. |
org.semanticweb.owlapi.model.OWLClass |
getEcoClassForCode(String code)
Retrieve the equivalent ECO class for the given GO evidence code. |
org.semanticweb.owlapi.model.OWLClass |
getEcoClassForCode(String code,
String refCode)
Retrieve the ECO class for the given GO evidence code and reference. |
boolean |
isGoEvidenceCode(String code)
Check that the given GO code is a valid code with an existing mapping to ECO |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Method Detail |
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public org.semanticweb.owlapi.model.OWLClass getEcoClassForCode(String code)
EcoMapper
getEcoClassForCode
in interface EcoMapper
OWLClass
or nullpublic Set<org.semanticweb.owlapi.model.OWLClass> getAllEcoClassesForCode(String code)
EcoMapper
getAllEcoClassesForCode
in interface EcoMapper
public org.semanticweb.owlapi.model.OWLClass getEcoClassForCode(String code, String refCode)
EcoMapper
getEcoClassForCode
in interface EcoMapper
OWLClass
or nullpublic boolean isGoEvidenceCode(String code)
EcoMapper
isGoEvidenceCode
in interface EcoMapper
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