owltools.gaf.rules.go
Class GoAnnotationTaxonRule
java.lang.Object
owltools.gaf.rules.AbstractAnnotationRule
owltools.gaf.rules.AnnotationTaxonRule
owltools.gaf.rules.go.GoAnnotationTaxonRule
- All Implemented Interfaces:
- AnnotationRule
public class GoAnnotationTaxonRule
- extends AnnotationTaxonRule
Checks if an annotation is valid according to GO taxon constraints.
Field Summary |
static String |
PERMANENT_JAVA_ID
The string to identify this class in the annotation_qc.xml and related factories. |
Method Summary |
protected void |
handleUnsatisfiable(Set<org.semanticweb.owlapi.model.OWLClass> unsatisfiable,
org.semanticweb.owlapi.model.OWLOntology ont)
|
Methods inherited from class owltools.gaf.rules.AbstractAnnotationRule |
getDate, getDescription, getGrandFatheringDate, getName, getPredictedAnnotations, getRuleId, getRuleViolations, getStatus, hasGrandFathering, isAnnotationLevel, isDocumentLevel, isInferringAnnotations, setDate, setDescription, setGrandFatheringDate, setName, setRuleId, setStatus |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
PERMANENT_JAVA_ID
public static final String PERMANENT_JAVA_ID
- The string to identify this class in the annotation_qc.xml and related factories.
This is not supposed to be changed.
- See Also:
- Constant Field Values
GoAnnotationTaxonRule
public GoAnnotationTaxonRule(OWLGraphWrapper graph,
String unsatifiableModule)
handleUnsatisfiable
protected void handleUnsatisfiable(Set<org.semanticweb.owlapi.model.OWLClass> unsatisfiable,
org.semanticweb.owlapi.model.OWLOntology ont)
- Overrides:
handleUnsatisfiable
in class AnnotationTaxonRule
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