Package owltools.gaf.inference

Perform inference on Gene Associations

See:
          Description

Interface Summary
AnnotationPredictor given a bioentity, predict a set of annotations
 

Class Summary
AbstractAnnotationPredictor  
BasicAnnotationPropagator This performs basic annotation inferences involving propagation between the 3 sub-ontologies in GO MF -> BP over part_of BP -> CC over occurs_in
ClassTaxonMatrix Matrix representing the applicability of classes and taxa.
CompositionalClassPredictor Deprecated.
FoldBasedPredictor see http://code.google.com/p/owltools/wiki/AnnotationExtensionFolding
Prediction  
TaxonConstraintsEngine Deprecated. There is now a taxon checks using an OWL resoner.
 

Package owltools.gaf.inference Description

Perform inference on Gene Associations



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