Package owltools.gaf.io

Interface Summary
PseudoRdfXmlWriter.ProgressReporter  
 

Class Summary
AbstractGafWriter General utility to write a GafDocument or GeneAnnotation.
AbstractXmlWriter Helper to write properly formated XML using an XMLStreamWriter.
GafWriter Write a Gene Annotation File to a given stream or file.
GafWriter.BufferedGafWriter Helper class to create a list of all GeneAnnotation lines, excluding any headers.
Can be used for sorting.
PseudoRdfXmlWriter Java implementation to create a legacy pseudo RDF XML file for GO terms and gene annotations.
XgmmlWriter Generates Xgmml for import into Cytoscape
 



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