owltools.gaf.owl.mapping
Class BasicABox

java.lang.Object
  extended by owltools.gaf.owl.GAFOWLBridge
      extended by owltools.gaf.owl.mapping.BasicABox

public class BasicABox
extends GAFOWLBridge


Nested Class Summary
 
Nested classes/interfaces inherited from class owltools.gaf.owl.GAFOWLBridge
GAFOWLBridge.BioentityMapping, GAFOWLBridge.GAFDescription, GAFOWLBridge.Vocab
 
Field Summary
 
Fields inherited from class owltools.gaf.owl.GAFOWLBridge
GAF_LINE_NUMBER_ANNOTATION_PROPERTY_IRI, graph
 
Constructor Summary
BasicABox(OWLGraphWrapper g)
           
 
Method Summary
protected  void translateBioentity(Bioentity e)
           
 void translateGeneAnnotation(GeneAnnotation a)
           
 
Methods inherited from class owltools.gaf.owl.GAFOWLBridge
addAxioms, getBioentityMapping, getDescription, getObjectPropertyByShorthand, getOWLClass, getTargetOntology, isBasicAboxMapping, isGenerateIndividuals, setBasicAboxMapping, setBioentityMapping, setGenerateIndividuals, setTargetOntology, translate
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

BasicABox

public BasicABox(OWLGraphWrapper g)
Method Detail

translateGeneAnnotation

public void translateGeneAnnotation(GeneAnnotation a)
Overrides:
translateGeneAnnotation in class GAFOWLBridge

translateBioentity

protected void translateBioentity(Bioentity e)
Overrides:
translateBioentity in class GAFOWLBridge


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