Deprecated API


Contents
Deprecated Classes
owltools.gaf.inference.CompositionalClassPredictor
           
owltools.gaf.EcoTools
          use EcoMapper, TraversingEcoMapper and EcoMapperFactory. 
owltools.gaf.inference.TaxonConstraintsEngine
          There is now a taxon checks using an OWL resoner. This implementation may over-report violations, i.e. taxon constrains should not be propagated over regulates relations. 
 

Deprecated Methods
owltools.gaf.lego.NetworkInferenceEngine.translateNetworkToOWL()
           
 

Deprecated Constructors
owltools.gaf.rules.go.GoAnnotationRulesFactoryImpl(String, String, ParserWrapper, String, String, String)
           
 



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