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See:
Description
Interface Summary | |
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GafLineFilter | |
GafParserListener |
Class Summary | |
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AnnotationSource | |
Bioentity | |
CompositeQualifier | |
EcoTools | Deprecated. use EcoMapper , TraversingEcoMapper and EcoMapperFactory . |
ExtensionExpression | Corresponds to col16 in GAF2.0 |
GafDocument | |
GafObjectsBuilder | The class builds GafDocument a gaf file. |
GAFParser | |
GeneAnnotation | |
IdMapping | |
TaxonTools | Methods to simplify the work with the evidence code ontology (ECO). |
WithInfo |
GAFParser
, and also contains GafObjectsBuilder
to
build Document Object Model from a gaf file. See gaf.GAFParserTest
and gaf.GafObjectsBuilderTest
classes to see examples how to use GafParser and GafObjectsBuilder classes.
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