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Interface Summary | |
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PseudoRdfXmlWriter.ProgressReporter |
Class Summary | |
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AbstractGafWriter | General utility to write a GafDocument or GeneAnnotation . |
AbstractXmlWriter | Helper to write properly formated XML using an XMLStreamWriter . |
GafWriter | Write a Gene Annotation File to a given stream or file. |
GafWriter.BufferedGafWriter | Helper class to create a list of all GeneAnnotation lines,
excluding any headers.Can be used for sorting. |
PseudoRdfXmlWriter | Java implementation to create a legacy pseudo RDF XML file for GO terms and gene annotations. |
XgmmlWriter | Generates Xgmml for import into Cytoscape |
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