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java.lang.Objectowltools.gaf.eco.EcoMapperImpl
owltools.gaf.eco.TraversingEcoMapperImpl
public class TraversingEcoMapperImpl
Field Summary |
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Fields inherited from interface owltools.gaf.eco.EcoMapper |
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ECO_MAPPING_PURL, ECO_PURL, ECO_PURL_IRI |
Method Summary | |
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void |
dispose()
Dispose this instance |
Set<String> |
getAllValidEvidenceIds(Set<String> codes,
boolean includeChildren)
Get all strings which are valid identifiers for the given evidence codes. |
Set<String> |
getAllValidEvidenceIds(String code,
boolean includeChildren)
Get all strings which are valid identifiers for a given evidence code. |
Set<org.semanticweb.owlapi.model.OWLClass> |
getAncestors(org.semanticweb.owlapi.model.OWLClass source,
boolean reflexive)
Traversing method for the ECO ontology. |
Set<org.semanticweb.owlapi.model.OWLClass> |
getAncestors(Set<org.semanticweb.owlapi.model.OWLClass> sources,
boolean reflexive)
Traversing method for the ECO ontology. |
Set<org.semanticweb.owlapi.model.OWLClass> |
getDescendents(org.semanticweb.owlapi.model.OWLClass source,
boolean reflexive)
Traversing method for the ECO ontology. |
Set<org.semanticweb.owlapi.model.OWLClass> |
getDescendents(Set<org.semanticweb.owlapi.model.OWLClass> sources,
boolean reflexive)
Traversing method for the ECO ontology. |
Methods inherited from class owltools.gaf.eco.EcoMapperImpl |
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getAllEcoClassesForCode, getCodesForEcoClasses, getEcoClassForCode, getEcoClassForCode, isGoEvidenceCode |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Methods inherited from interface owltools.gaf.eco.EcoMapper |
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getAllEcoClassesForCode, getCodesForEcoClasses, getEcoClassForCode, getEcoClassForCode, isGoEvidenceCode |
Method Detail |
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public Set<org.semanticweb.owlapi.model.OWLClass> getAncestors(Set<org.semanticweb.owlapi.model.OWLClass> sources, boolean reflexive)
TraversingEcoMapper
getAncestors
in interface TraversingEcoMapper
public Set<org.semanticweb.owlapi.model.OWLClass> getAncestors(org.semanticweb.owlapi.model.OWLClass source, boolean reflexive)
TraversingEcoMapper
getAncestors
in interface TraversingEcoMapper
public Set<org.semanticweb.owlapi.model.OWLClass> getDescendents(Set<org.semanticweb.owlapi.model.OWLClass> sources, boolean reflexive)
TraversingEcoMapper
getDescendents
in interface TraversingEcoMapper
public Set<org.semanticweb.owlapi.model.OWLClass> getDescendents(org.semanticweb.owlapi.model.OWLClass source, boolean reflexive)
TraversingEcoMapper
getDescendents
in interface TraversingEcoMapper
public Set<String> getAllValidEvidenceIds(String code, boolean includeChildren)
TraversingEcoMapper
getAllValidEvidenceIds
in interface TraversingEcoMapper
public Set<String> getAllValidEvidenceIds(Set<String> codes, boolean includeChildren)
TraversingEcoMapper
getAllValidEvidenceIds
in interface TraversingEcoMapper
public void dispose()
TraversingEcoMapper
dispose
in interface TraversingEcoMapper
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