Uses of Class
owltools.gaf.lego.MolecularModelManager.OWLOperationResponse

Packages that use MolecularModelManager.OWLOperationResponse
owltools.gaf.lego   
 

Uses of MolecularModelManager.OWLOperationResponse in owltools.gaf.lego
 

Methods in owltools.gaf.lego that return MolecularModelManager.OWLOperationResponse
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addAnnotations(String modelId, org.semanticweb.owlapi.model.OWLObjectPropertyExpression p, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLNamedIndividual j, Set<org.semanticweb.owlapi.model.OWLAnnotation> annotations)
           
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addCompositeIndividual(String modelId, String classId, String enabledById, String occursInId)
          A simple wrapping function that captures the most basic type of editing.
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addEnabledBy(String modelId, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLClassExpression enabler)
          Adds a ClassAssertion to the model, connecting an activity instance to the class of molecule that enables the activity.
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addEnabledBy(String modelId, String iid, String eid)
          Convenience wrapper for MolecularModelManager.addEnabledBy(String, OWLNamedIndividual, OWLClassExpression)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addFact(String modelId, OBOUpperVocabulary vocabElement, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLNamedIndividual j, Set<org.semanticweb.owlapi.model.OWLAnnotation> annotations)
          Convenience wrapper for MolecularModelManager.addFact(String, OWLObjectPropertyExpression, OWLNamedIndividual, OWLNamedIndividual, Set)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addFact(String modelId, OBOUpperVocabulary vocabElement, String iid, String jid, Collection<org.apache.commons.lang3.tuple.Pair<String,String>> pairs)
          Convenience wrapper for MolecularModelManager.addFact(String, OWLObjectPropertyExpression, OWLNamedIndividual, OWLNamedIndividual, Set)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addFact(String modelId, org.semanticweb.owlapi.model.OWLObjectPropertyExpression p, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLNamedIndividual j, Set<org.semanticweb.owlapi.model.OWLAnnotation> annotations)
          Adds triple (i,p,j) to specified model
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addFact(String modelId, String pid, String iid, String jid, Collection<org.apache.commons.lang3.tuple.Pair<String,String>> pairs)
          Convenience wrapper for MolecularModelManager.addFact(String, OWLObjectPropertyExpression, OWLNamedIndividual, OWLNamedIndividual, Set)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addOccursIn(String modelId, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLClassExpression enabler)
          Adds a ClassAssertion to the model, connecting an activity instance to the class of molecule that enables the activity.
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addOccursIn(String modelId, String iid, String eid)
          Convenience wrapper for MolecularModelManager.addOccursIn(String, OWLNamedIndividual, OWLClassExpression)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addPartOf(String modelId, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLNamedIndividual j, Set<org.semanticweb.owlapi.model.OWLAnnotation> annotations)
          Adds an OWL ObjectPropertyAssertion connecting i to j via part_of Note that the inverse assertion is entailed, but not asserted
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addPartOf(String modelId, String iid, String jid, Collection<org.apache.commons.lang3.tuple.Pair<String,String>> pairs)
          Convenience wrapper for MolecularModelManager.addPartOf(String, OWLNamedIndividual, OWLNamedIndividual, Set)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addType(String modelId, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLClass c)
          Adds ClassAssertion(c,i) to specified model
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addType(String modelId, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLObjectPropertyExpression p, org.semanticweb.owlapi.model.OWLClassExpression filler)
          Adds a ClassAssertion, where the class expression instantiated is an ObjectSomeValuesFrom expression Example: Individual: i Type: enabledBy some PRO_123
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addType(String modelId, String iid, String cid)
          Convenience wrapper for MolecularModelManager.addType(String, OWLNamedIndividual, OWLClass)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.addType(String modelId, String iid, String pid, String cid)
          Convenience wrapper for MolecularModelManager.addType(String, OWLNamedIndividual, OWLObjectPropertyExpression, OWLClassExpression)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.createIndividual(String modelId, org.semanticweb.owlapi.model.OWLClass c)
           
 MolecularModelManager.OWLOperationResponse MolecularModelManager.createIndividual(String modelId, String cid, Collection<org.apache.commons.lang3.tuple.Pair<String,String>> annotations)
          Shortcut for MolecularModelManager.createIndividual(String, OWLClass)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.deleteIndividual(String modelId, org.semanticweb.owlapi.model.OWLNamedIndividual i)
          Deletes an individual
 MolecularModelManager.OWLOperationResponse MolecularModelManager.deleteIndividual(String modelId, String iid)
          Deletes an individual
 MolecularModelManager.OWLOperationResponse MolecularModelManager.getIndividualById(String modelId, String iid)
          Get the individual information for return.
 MolecularModelManager.OWLOperationResponse MolecularModelManager.removeFact(String modelId, org.semanticweb.owlapi.model.OWLObjectPropertyExpression p, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLNamedIndividual j)
           
 MolecularModelManager.OWLOperationResponse MolecularModelManager.removeFact(String modelId, String pid, String iid, String jid)
           
 MolecularModelManager.OWLOperationResponse MolecularModelManager.removeType(String modelId, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLClass c)
          remove ClassAssertion(c,i) to specified model
 MolecularModelManager.OWLOperationResponse MolecularModelManager.removeType(String modelId, org.semanticweb.owlapi.model.OWLNamedIndividual i, org.semanticweb.owlapi.model.OWLObjectPropertyExpression p, org.semanticweb.owlapi.model.OWLClassExpression filler)
          Removes a ClassAssertion, where the class expression instantiated is an ObjectSomeValuesFrom expression TODO - in future it should be possible to remove multiple assertions by leaving some fields null
 MolecularModelManager.OWLOperationResponse MolecularModelManager.removeType(String modelId, String iid, String cid)
          Convenience wrapper for MolecularModelManager.removeType(String, OWLNamedIndividual, OWLClass)
 MolecularModelManager.OWLOperationResponse MolecularModelManager.undo(String modelId, String changeId)
           
 



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