Package owltools.gaf.rules

Interface Summary
AnnotationRule  
AnnotationRulesFactory  
 

Class Summary
AbstractAnnotationRule  
AnnotationRegularExpressionFromXMLRule This class implements execution of the regular expression rules.
AnnotationRulesEngine  
AnnotationRulesEngine.AnnotationRulesEngineResult Results for a run of the AnnotationRulesEngine.
AnnotationRulesFactoryImpl This class reads the annotation_qc.xml file and builds AnnotationRule objects from the qc file.
AnnotationRulesReportWriter Write reports for the results of annotations validation and prediction.
AnnotationRuleViolation Data associated with a rule violation
AnnotationTaxonRule Checks if an annotation is valid according to taxon constraints.
GenericReasonerValidationCheck This check using the ElkReasoner will not detect unsatisfiable classes, which result from inverse_of object properties.
 

Enum Summary
AnnotationRuleViolation.ViolationType  
 

Exception Summary
AnnotationRulesEngine.AnnotationRuleCheckException This exception is thrown when an exception occurs during the execution of annotation rules.
 



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