public class EcoMapperImpl extends Object implements EcoMapper
ECO_MAPPING_PURL, ECO_PURL, ECO_PURL_IRI
Modifier and Type | Method and Description |
---|---|
Set<org.semanticweb.owlapi.model.OWLClass> |
getAllEcoClassesForCode(String code)
Retrieve the ECO classes for the given GO evidence code.
|
Map<org.semanticweb.owlapi.model.OWLClass,String> |
getCodesForEcoClasses()
Retrieve the mapping from ECO classes to GO evidence codes.
|
org.semanticweb.owlapi.model.OWLClass |
getEcoClassForCode(String code)
Retrieve the equivalent ECO class for the given GO evidence code.
|
org.semanticweb.owlapi.model.OWLClass |
getEcoClassForCode(String code,
String refCode)
Retrieve the ECO class for the given GO evidence code and reference.
|
boolean |
isGoEvidenceCode(String code)
Check that the given GO code is a valid code with an existing mapping to ECO
|
public org.semanticweb.owlapi.model.OWLClass getEcoClassForCode(String code)
EcoMapper
getEcoClassForCode
in interface EcoMapper
OWLClass
or nullpublic Set<org.semanticweb.owlapi.model.OWLClass> getAllEcoClassesForCode(String code)
EcoMapper
getAllEcoClassesForCode
in interface EcoMapper
public org.semanticweb.owlapi.model.OWLClass getEcoClassForCode(String code, String refCode)
EcoMapper
getEcoClassForCode
in interface EcoMapper
OWLClass
or nullpublic boolean isGoEvidenceCode(String code)
EcoMapper
isGoEvidenceCode
in interface EcoMapper
public Map<org.semanticweb.owlapi.model.OWLClass,String> getCodesForEcoClasses()
EcoMapper
getCodesForEcoClasses
in interface EcoMapper
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