owltools.phenolog
Class Pheno
java.lang.Object
owltools.phenolog.Pheno
- All Implemented Interfaces:
- Comparable<Pheno>
public class Pheno
- extends Object
- implements Comparable<Pheno>
represents an attribute-bearing entity; for example, a phenotype.
Pheno
public Pheno()
Pheno
public Pheno(String id)
Pheno
public Pheno(String id,
String label)
Pheno
public Pheno(String id,
String label,
HashSet<Individual> individuals)
Pheno
public Pheno(String id,
String label,
HashSet<Individual> individuals,
boolean isFromTC)
equals
public boolean equals(Object aPheno)
- Overrides:
equals
in class Object
hashCode
public int hashCode()
- Overrides:
hashCode
in class Object
compareTo
public int compareTo(Pheno p)
- Specified by:
compareTo
in interface Comparable<Pheno>
getId
public String getId()
setId
public void setId(String id)
getLabel
public String getLabel()
setLabel
public void setLabel(String label)
setClosest
public void setClosest(Pheno closest)
getClosest
public Pheno getClosest()
setClosestDistance
public void setClosestDistance(double closestdistance)
getClosestDistance
public double getClosestDistance()
setClosestOverlap
public void setClosestOverlap(int closestoverlap)
getClosestOverlap
public int getClosestOverlap()
setClosestOverlapPairs
public void setClosestOverlapPairs(HashSet<IndividualPair> hsip)
getClosestOverlapPairs
public HashSet<IndividualPair> getClosestOverlapPairs()
getIndividuals
public HashSet<Individual> getIndividuals()
setIndividuals
public void setIndividuals(HashSet<Individual> individuals)
setisFromTC
public void setisFromTC(boolean isFromTC)
getisFromTC
public boolean getisFromTC()
getancestors
public HashSet<Pheno> getancestors()
setancestors
public void setancestors(HashSet<Pheno> ancestors)
setNonTCIndividualSize
public void setNonTCIndividualSize(int NonTCIndividualSize)
getNonTCIndividualSize
public int getNonTCIndividualSize()
Copyright © 2010-2012. All Rights Reserved.