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See:
Description
Interface Summary | |
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GraphReader | |
GraphRenderer |
Class Summary | |
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AbstractClosureReader | |
AbstractClosureRenderer | Renders the graph closure - i.e. |
ChadoGraphClosureRenderer | implements a graph closure writer suitable for imports into Chado; in particular: (i) all identifiers are translated to OBO IDs (ii) relationship chains of length > 1 are ignored (iii) SUBCLASS is written as is_a, and only existential restrictions are emitted |
CompactGraphClosureReader | Note that the ontology must be loaded prior to restored a closure table |
CompactGraphClosureRenderer | Similar to GraphClosureRenderer, writes in a more compact format |
GraphClosureRenderer | |
OWLGsonRenderer | |
OWLPrettyPrinter | |
ParserWrapper | Convenience class wrapping org.oboformat that abstracts away underlying details of ontology format or location |
TableToAxiomConverter | reads in a table (e.g. |
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