owltools.io
Class ChadoGraphClosureRenderer
java.lang.Object
owltools.io.AbstractClosureRenderer
owltools.io.ChadoGraphClosureRenderer
- All Implemented Interfaces:
- GraphRenderer
public class ChadoGraphClosureRenderer
- extends AbstractClosureRenderer
- implements GraphRenderer
implements a graph closure writer suitable for imports into Chado; in particular:
(i) all identifiers are translated to OBO IDs
(ii) relationship chains of length > 1 are ignored
(iii) SUBCLASS is written as is_a, and only existential restrictions are emitted
- Author:
- cjm
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
isChain
public boolean isChain
ChadoGraphClosureRenderer
public ChadoGraphClosureRenderer(PrintStream stream)
ChadoGraphClosureRenderer
public ChadoGraphClosureRenderer(String file)
render
public void render(OWLGraphEdge e)
- Specified by:
render
in class AbstractClosureRenderer
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