AbstractClosureReader
AbstractClosureRenderer
AbstractMappingParser
AsymmetricJaccardSimilarity
Attribute
AvgInformationContentBestMatchesSimilarity
AvgInformationContentLCSSimilarity
BloomFilter
CatalogXmlIRIMapper
ChadoGraphClosureRenderer
ClassExpressionGraphClosureRenderer
CombinedJaccardConjunctiveSetSimilarity
CombinedSimilarity
CombinedSimilarity2
CompactGraphClosureReader
CompactGraphClosureRenderer
ConjunctiveSetInformationContentRatioSimilarity
ConjunctiveSetSimilarity
DescriptionTreeSimilarity
DisjunctiveSetSimilarity
DLQueryTool
ExpressionMaterializingReasoner
GenePheno
GenePhenoTsvParser
GraphClosureRenderer
GraphicsConfig
GraphReader
GraphReasoner
GraphReasonerFactory
GraphRenderer
GraphStyle
HierarchyImage
IDMapHandler
IDMapPairWriter
IDMappingPIRParser
IDMappingPIRParser.Types
ImageRender
ImportClosureSlurper
Individual
IndividualPair
InferenceBuilder
InferenceBuilder.FactoryDetails
JaccardBloomSimilarity
JaccardSimilarity
Main
MaximumInformationContentSimilarity
Mooncat
MultiSimilarity
OntologyMetaDataTools
OntologyMetaDataTools.AnnotationCardinalityConfictHandler
OntologyMetaDataTools.AnnotationCardinalityException
OverlapSimilarity
OWLExtendedReasoner
OWLGraphEdge
OWLGraphLayoutNode
OWLGraphLayoutRenderer
OWLGraphStrokeEdge
OWLGraphStrokeEdge.SVGEdge
OWLGraphUtil
OWLGraphvizRenderer
OWLGraphWrapper
OWLGraphWrapper.ISynonym
OWLGraphWrapper.Synonym
OWLGsonRenderer
OWLObjectPair
OWLPrettyPrinter
OWLQuantifiedProperty
OWLQuantifiedProperty.Quantifier
OWLReasonerRunner
OWLShuntEdge
OWLShuntGraph
OWLShuntNode
ParserWrapper
ParserWrapper.OWLGraphWrapperNameProvider
Pheno
PhenologEngine
PhenoTransitiveClosure
PlaceholderJcelFactory
Profiler
PropertyViewOntologyBuilder
QuerySubsetGenerator
ReasonerDiff
RelationType
RelationType.Polarity
Reporter
ResonerDiffCommandLine
SharedLabelException
SimEngine
Similarity
SimilarityCalculator
SimSearch
TableToAxiomConverter
TBoxUnFoldingTool
TBoxUnFoldingTool.NonDeterministicUnfoldException
UniProtIDMapParser
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