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Hierarchy For All Packages
Package Hierarchies:
owltools
,
owltools.diff
,
owltools.gfx
,
owltools.graph
,
owltools.graph.shunt
,
owltools.idmap
,
owltools.io
,
owltools.mooncat
,
owltools.phenolog
,
owltools.profile
,
owltools.reasoner
,
owltools.sim
,
owltools.util
Class Hierarchy
java.lang.
Object
owltools.io.
AbstractClosureReader
(implements owltools.io.
GraphReader
)
owltools.io.
CompactGraphClosureReader
owltools.io.
AbstractClosureRenderer
(implements owltools.io.
GraphRenderer
)
owltools.io.
ChadoGraphClosureRenderer
(implements owltools.io.
GraphRenderer
)
owltools.io.
ClassExpressionGraphClosureRenderer
(implements owltools.io.
GraphRenderer
)
owltools.io.
CompactGraphClosureRenderer
(implements owltools.io.
GraphRenderer
)
owltools.io.
GraphClosureRenderer
(implements owltools.io.
GraphRenderer
)
owltools.idmap.
AbstractMappingParser
owltools.idmap.
IDMappingPIRParser
owltools.idmap.
UniProtIDMapParser
owltools.phenolog.
Attribute
owltools.util.
BloomFilter
<E> (implements java.io.
Serializable
)
owltools.io.
CatalogXmlIRIMapper
(implements org.semanticweb.owlapi.model.OWLOntologyIRIMapper)
owltools.mooncat.
DLQueryTool
owltools.phenolog.
GenePheno
(implements java.lang.
Comparable
<T>)
owltools.phenolog.
GenePhenoTsvParser
owltools.gfx.
GraphicsConfig
owltools.gfx.
GraphicsConfig.RelationConfig
owltools.reasoner.
GraphReasonerFactory
(implements org.semanticweb.owlapi.reasoner.OWLReasonerFactory)
owltools.gfx.
GraphStyle
owltools.idmap.
IDMapHandler
owltools.idmap.
IDMapPairWriter
owltools.gfx.
ImageRender
owltools.gfx.
HierarchyImage
owltools.io.
ImportClosureSlurper
owltools.phenolog.
Individual
(implements java.lang.
Comparable
<T>)
owltools.phenolog.
IndividualPair
(implements java.lang.
Comparable
<T>)
owltools.
InferenceBuilder
owltools.
InferenceBuilder.FactoryDetails
owltools.phenolog.
Main
owltools.mooncat.
Mooncat
owltools.mooncat.
OntologyMetaDataTools
owltools.graph.
OWLGraphEdge
owltools.gfx.
OWLGraphLayoutNode
(implements uk.ac.ebi.interpro.graphdraw.LayoutNode, uk.ac.ebi.interpro.graphdraw.Node)
owltools.gfx.
OWLGraphLayoutNode.SVGRectangle
owltools.gfx.
OWLGraphLayoutRenderer
owltools.gfx.
OWLGraphvizRenderer
owltools.gfx.
OWLGraphStrokeEdge.SVGEdge
owltools.graph.
OWLGraphUtil
owltools.graph.
OWLGraphWrapper
owltools.graph.
OWLGraphWrapper.Config
owltools.graph.
OWLGraphWrapper.Synonym
(implements owltools.graph.
OWLGraphWrapper.ISynonym
)
owltools.io.
OWLGsonRenderer
owltools.sim.
OWLObjectPair
owltools.io.
OWLPrettyPrinter
owltools.io.
OWLPrettyPrinter.LabelProvider
(implements org.semanticweb.owlapi.util.ShortFormProvider)
owltools.graph.
OWLQuantifiedProperty
org.semanticweb.owlapi.reasoner.impl.OWLReasonerBase (implements org.semanticweb.owlapi.reasoner.OWLReasoner)
owltools.reasoner.
ExpressionMaterializingReasoner
(implements owltools.reasoner.
OWLExtendedReasoner
)
owltools.reasoner.
GraphReasoner
(implements owltools.reasoner.
OWLExtendedReasoner
)
owltools.
OWLReasonerRunner
owltools.graph.shunt.
OWLShuntEdge
owltools.graph.shunt.
OWLShuntGraph
owltools.graph.shunt.
OWLShuntNode
owltools.io.
ParserWrapper
owltools.io.
ParserWrapper.OWLGraphWrapperNameProvider
(implements org.obolibrary.oboformat.writer.OBOFormatWriter.NameProvider)
owltools.phenolog.
Pheno
(implements java.lang.
Comparable
<T>)
owltools.phenolog.
PhenologEngine
owltools.phenolog.
PhenoTransitiveClosure
owltools.reasoner.
PlaceholderJcelFactory
(implements org.semanticweb.owlapi.reasoner.OWLReasonerFactory)
owltools.profile.
Profiler
owltools.mooncat.
PropertyViewOntologyBuilder
owltools.mooncat.
QuerySubsetGenerator
owltools.diff.
ReasonerDiff
owltools.sim.
Reporter
owltools.diff.
ResonerDiffCommandLine
owltools.sim.
SimEngine
owltools.sim.
Similarity
owltools.sim.
AsymmetricJaccardSimilarity
owltools.sim.
AvgInformationContentBestMatchesSimilarity
owltools.sim.
AvgInformationContentLCSSimilarity
owltools.sim.
CombinedJaccardConjunctiveSetSimilarity
owltools.sim.
CombinedSimilarity
owltools.sim.
CombinedSimilarity2
owltools.sim.
ConjunctiveSetInformationContentRatioSimilarity
owltools.sim.
ConjunctiveSetSimilarity
owltools.sim.
DescriptionTreeSimilarity
owltools.sim.
DisjunctiveSetSimilarity
owltools.sim.
JaccardBloomSimilarity
owltools.sim.
JaccardSimilarity
owltools.sim.
MaximumInformationContentSimilarity
owltools.sim.
MultiSimilarity
owltools.sim.
OverlapSimilarity
owltools.sim.
SimSearch
uk.ac.ebi.interpro.graphdraw.StrokeEdge<N> (implements uk.ac.ebi.interpro.graphdraw.LayoutEdge<N>)
owltools.gfx.
OWLGraphStrokeEdge
owltools.io.
TableToAxiomConverter
owltools.io.
TableToAxiomConverter.Config
owltools.
TBoxUnFoldingTool
java.lang.
Throwable
(implements java.io.
Serializable
)
java.lang.
Exception
owltools.mooncat.
OntologyMetaDataTools.AnnotationCardinalityException
owltools.graph.
SharedLabelException
owltools.sim.
SimEngine.SimilarityAlgorithmException
owltools.
TBoxUnFoldingTool.NonDeterministicUnfoldException
Interface Hierarchy
owltools.io.
GraphReader
owltools.io.
GraphRenderer
owltools.mooncat.
OntologyMetaDataTools.AnnotationCardinalityConfictHandler
owltools.graph.
OWLGraphWrapper.ISynonym
org.semanticweb.owlapi.reasoner.OWLReasoner
owltools.reasoner.
OWLExtendedReasoner
owltools.sim.
SimilarityCalculator
Enum Hierarchy
java.lang.
Object
java.lang.
Enum
<E> (implements java.lang.
Comparable
<T>, java.io.
Serializable
)
owltools.gfx.
RelationType
owltools.gfx.
RelationType.Polarity
owltools.graph.
OWLQuantifiedProperty.Quantifier
owltools.idmap.
IDMappingPIRParser.Types
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