A G H I L M O P Q S T V

A

aboutCommand() - Method in class owltools.web.OWLHandler
information about an ontology object (class, property, individual)
allSubClassOfCommand() - Method in class owltools.web.OWLHandler
 

G

getCommandName() - Method in class owltools.web.OWLHandler
 
getFormat() - Method in class owltools.web.OWLHandler
 
getOutgoingEdgesCommand() - Method in class owltools.web.OWLHandler
 
getReasoner(String) - Method in class owltools.web.OWLServer
 
getSuperClassesCommand() - Method in class owltools.web.OWLHandler
 

H

handle(String, Request, HttpServletRequest, HttpServletResponse) - Method in class owltools.web.OWLServer
 
headerHTML() - Method in class owltools.web.OWLHandler
 
headerImage(String) - Method in class owltools.web.OWLHandler
 
headerOWL() - Method in class owltools.web.OWLHandler
 
headerText() - Method in class owltools.web.OWLHandler
 
helpCommand() - Method in class owltools.web.OWLHandler
 

I

info(String) - Method in class owltools.web.OWLHandler
 
isClassApplicableForTaxonCommand() - Method in class owltools.web.OWLHandler
tests which of a set of input classes (specified using id) is applicable for a set of taxa (specified using taxid)

L

lcsExpressionCommand() - Method in class owltools.web.OWLHandler
 

M

makeSubsetOntologyCommand() - Method in class owltools.web.OWLHandler
generates a sub-ontology consisting only of classes specified using the id param.

O

OWLHandler - Class in owltools.web
 
OWLHandler(OWLServer, OWLGraphWrapper, HttpServletRequest, HttpServletResponse) - Constructor for class owltools.web.OWLHandler
 
OWLHandler.Param - Enum in owltools.web
 
OWLHandler.ResultType - Enum in owltools.web
 
OWLServer - Class in owltools.web
 
OWLServer(OWLGraphWrapper) - Constructor for class owltools.web.OWLServer
 
owltools.web - package owltools.web
OWLTools Web Services

P

printCachedObjects() - Method in class owltools.web.OWLHandler
 

Q

qvizCommand() - Method in class owltools.web.OWLHandler
visualize using QuickGO graphdraw.

S

setCommandName(String) - Method in class owltools.web.OWLHandler
 
setFormat(String) - Method in class owltools.web.OWLHandler
 

T

topCommand() - Method in class owltools.web.OWLHandler
 

V

valueOf(String) - Static method in enum owltools.web.OWLHandler.Param
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum owltools.web.OWLHandler.ResultType
Returns the enum constant of this type with the specified name.
values() - Static method in enum owltools.web.OWLHandler.Param
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum owltools.web.OWLHandler.ResultType
Returns an array containing the constants of this enum type, in the order they are declared.

A G H I L M O P Q S T V

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