Uses of Class
org.obolibrary.oboformat.model.Clause

Packages that use Clause
org.obolibrary.obo2owl   
org.obolibrary.oboformat.diff   
org.obolibrary.oboformat.model   
org.obolibrary.oboformat.parser   
org.obolibrary.oboformat.writer   
 

Uses of Clause in org.obolibrary.obo2owl
 

Methods in org.obolibrary.obo2owl with parameters of type Clause
protected  org.semanticweb.owlapi.model.OWLAxiom Obo2Owl.trGenericClause(org.semanticweb.owlapi.model.OWLAnnotationSubject sub, String tag, Clause clause)
           
 

Uses of Clause in org.obolibrary.oboformat.diff
 

Methods in org.obolibrary.oboformat.diff that return Clause
 Clause Diff.getClause1()
           
 Clause Diff.getClause2()
           
 

Methods in org.obolibrary.oboformat.diff with parameters of type Clause
 void Diff.setClause1(Clause clause1)
           
 void Diff.setClause2(Clause clause2)
           
 

Constructors in org.obolibrary.oboformat.diff with parameters of type Clause
Diff(String ftype, String type, Frame f1, Frame f2, Clause c, int n)
           
 

Uses of Clause in org.obolibrary.oboformat.model
 

Fields in org.obolibrary.oboformat.model with type parameters of type Clause
protected  Collection<Clause> Frame.clauses
           
 

Methods in org.obolibrary.oboformat.model that return Clause
 Clause Frame.getClause(OBOFormatConstants.OboFormatTag tag)
           
 Clause Frame.getClause(String tag)
           
 

Methods in org.obolibrary.oboformat.model that return types with arguments of type Clause
 Collection<Clause> Frame.getClauses()
           
 Collection<Clause> Frame.getClauses(OBOFormatConstants.OboFormatTag tag)
           
 Collection<Clause> Frame.getClauses(String tag)
           
 

Methods in org.obolibrary.oboformat.model with parameters of type Clause
 void Frame.addClause(Clause cl)
           
 

Method parameters in org.obolibrary.oboformat.model with type arguments of type Clause
 void Frame.setClauses(Collection<Clause> clauses)
           
 

Uses of Clause in org.obolibrary.oboformat.parser
 

Methods in org.obolibrary.oboformat.parser with parameters of type Clause
protected  boolean OBOFormatParser.parseSynonymXrefs(Clause cl, boolean createEmpty)
           
 boolean OBOFormatParser.parseTermFrameClause(Clause cl)
           
 boolean OBOFormatParser.parseTypedefFrameClause(Clause cl)
           
protected  boolean OBOFormatParser.parseUnquotedString(Clause cl)
           
 

Uses of Clause in org.obolibrary.oboformat.writer
 

Methods in org.obolibrary.oboformat.writer with parameters of type Clause
 void OBOFormatWriter.write(Clause clause, BufferedWriter writer, OBOFormatWriter.NameProvider nameProvider)
           
 void OBOFormatWriter.writeDef(Clause clause, BufferedWriter writer)
           
 void OBOFormatWriter.writePropertyValue(Clause clause, BufferedWriter writer)
           
 void OBOFormatWriter.writeSynonym(Clause clause, BufferedWriter writer)
           
 

Method parameters in org.obolibrary.oboformat.writer with type arguments of type Clause
static void OBOFormatWriter.sortTermClauses(List<Clause> clauses)
          Sort a list of term frame clauses according to in the OBO format specified tag and value order.
 



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