org.geneontology.lego.model
Class LegoTools
java.lang.Object
org.geneontology.lego.model.LegoTools
public class LegoTools
- extends Object
Tool to convert the OWL representation of annotations into the rendering model.
- See Also:
LegoNode
,
LegoLink
Constructor Summary |
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LegoTools(owltools.graph.OWLGraphWrapper graph,
org.semanticweb.owlapi.reasoner.OWLReasoner reasoner)
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LegoTools(owltools.graph.OWLGraphWrapper graph,
org.semanticweb.owlapi.reasoner.OWLReasoner reasoner,
boolean ignoreUnknownTypes)
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protected |
LegoTools(owltools.graph.OWLGraphWrapper graph,
org.semanticweb.owlapi.reasoner.OWLReasoner reasoner,
Set<org.semanticweb.owlapi.model.OWLObjectProperty> enabled_by,
Set<org.semanticweb.owlapi.model.OWLObjectProperty> occurs_in,
Set<org.semanticweb.owlapi.model.OWLObjectProperty> part_of,
org.semanticweb.owlapi.model.OWLClass mf,
org.semanticweb.owlapi.model.OWLClass bp,
boolean ignoreUnknownTypes)
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Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
LegoTools
public LegoTools(owltools.graph.OWLGraphWrapper graph,
org.semanticweb.owlapi.reasoner.OWLReasoner reasoner)
- Parameters:
graph
- reasoner
-
LegoTools
public LegoTools(owltools.graph.OWLGraphWrapper graph,
org.semanticweb.owlapi.reasoner.OWLReasoner reasoner,
boolean ignoreUnknownTypes)
- Parameters:
graph
- reasoner
- ignoreUnknownTypes
-
LegoTools
protected LegoTools(owltools.graph.OWLGraphWrapper graph,
org.semanticweb.owlapi.reasoner.OWLReasoner reasoner,
Set<org.semanticweb.owlapi.model.OWLObjectProperty> enabled_by,
Set<org.semanticweb.owlapi.model.OWLObjectProperty> occurs_in,
Set<org.semanticweb.owlapi.model.OWLObjectProperty> part_of,
org.semanticweb.owlapi.model.OWLClass mf,
org.semanticweb.owlapi.model.OWLClass bp,
boolean ignoreUnknownTypes)
- Parameters:
graph
- reasoner
- enabled_by
- occurs_in
- part_of
- mf
- bp
- ignoreUnknownTypes
-
createLegoNodes
public Collection<LegoNode> createLegoNodes(Collection<org.semanticweb.owlapi.model.OWLNamedIndividual> individuals)
throws LegoTools.UnExpectedStructureException
- Throws:
LegoTools.UnExpectedStructureException
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